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» Practical and Optimal String Matching
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APBC
2007
110views Bioinformatics» more  APBC 2007»
14 years 11 months ago
Fast Structural Similarity Search Based on Topology String Matching
ibe an abstract data model of protein structures by representing the geometry of proteins using spatial data types and present a framework for fast structural similarity search bas...
Sung-Hee Park, David Gilbert, Keun Ho Ryu
GLOBECOM
2010
IEEE
14 years 7 months ago
Independent Parallel Compact Finite Automatons for Accelerating Multi-String Matching
Multi-string matching is a key technique for implementing network security applications like Network Intrusion Detection Systems (NIDS) and anti-virus scanners. Existing DFA-based ...
Yi Tang, Junchen Jiang, Xiaofei Wang, Bin Liu, Yan...
SPIRE
2007
Springer
15 years 3 months ago
Approximate String Matching with Lempel-Ziv Compressed Indexes
Abstract. A compressed full-text self-index for a text T is a data structure requiring reduced space and able of searching for patterns P in T. Furthermore, the structure can repro...
Luís M. S. Russo, Gonzalo Navarro, Arlindo ...
WEA
2007
Springer
125views Algorithms» more  WEA 2007»
15 years 3 months ago
Simple Compression Code Supporting Random Access and Fast String Matching
Given a sequence S of n symbols over some alphabet Σ, we develop a new compression method that is (i) very simple to implement; (ii) provides O(1) time random access to any symbol...
Kimmo Fredriksson, Fedor Nikitin
HPCA
2004
IEEE
15 years 10 months ago
Creating Converged Trace Schedules Using String Matching
This paper focuses on generating efficient software pipelined schedules for in-order machines, which we call Converged Trace Schedules. For a candidate loop, we form a string of t...
Satish Narayanasamy, Yuanfang Hu, Suleyman Sair, B...