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» Predicting Peroxisomal Proteins
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BMCBI
2007
142views more  BMCBI 2007»
14 years 10 months ago
Predicting and improving the protein sequence alignment quality by support vector regression
Background: For successful protein structure prediction by comparative modeling, in addition to identifying a good template protein with known structure, obtaining an accurate seq...
Minho Lee, Chan-seok Jeong, Dongsup Kim
BMCBI
2008
102views more  BMCBI 2008»
14 years 10 months ago
Combining sequence-based prediction methods and circular dichroism and infrared spectroscopic data to improve protein secondary
Background: A number of sequence-based methods exist for protein secondary structure prediction. Protein secondary structures can also be determined experimentally from circular d...
Jonathan G. Lees, Robert W. Janes
NAR
2006
89views more  NAR 2006»
14 years 9 months ago
AlgPred: prediction of allergenic proteins and mapping of IgE epitopes
In this study a systematic attempt has been made to integrate various approaches in order to predict allergenic proteins with high accuracy. The dataset used for testing and train...
Sudipto Saha, G. P. S. Raghava
BIOINFORMATICS
2005
114views more  BIOINFORMATICS 2005»
14 years 9 months ago
Predicting protein localization in budding Yeast
Motivation: Most of the existing methods in predicting protein subcellular location were used to deal with the cases limited within the scope from two to five localizations, and o...
Kuo-Chen Chou, Yu-Dong Cai
BMCBI
2008
110views more  BMCBI 2008»
14 years 10 months ago
Predikin and PredikinDB: a computational framework for the prediction of protein kinase peptide specificity and an associated da
Background: We have previously described an approach to predicting the substrate specificity of serine-threonine protein kinases. The method, named Predikin, identifies key conser...
Neil F. W. Saunders, Ross I. Brinkworth, Thomas Hu...