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BIOINFORMATICS
2005
114views more  BIOINFORMATICS 2005»
15 years 4 months ago
Predicting protein localization in budding Yeast
Motivation: Most of the existing methods in predicting protein subcellular location were used to deal with the cases limited within the scope from two to five localizations, and o...
Kuo-Chen Chou, Yu-Dong Cai
130
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BMCBI
2005
122views more  BMCBI 2005»
15 years 4 months ago
ASPIC: a novel method to predict the exon-intron structure of a gene that is optimally compatible to a set of transcript sequenc
Background: Currently available methods to predict splice sites are mainly based on the independent and progressive alignment of transcript data (mostly ESTs) to the genomic seque...
Paola Bonizzoni, Raffaella Rizzi, Graziano Pesole
BMCBI
2005
84views more  BMCBI 2005»
15 years 4 months ago
Information theory-based algorithm for in silico prediction of PCR products with whole genomic sequences as templates
Background: A new algorithm for assessing similarity between primer and template has been developed based on the hypothesis that annealing of primer to template is an information ...
Youfang Cao, Lianjie Wang, Kexue Xu, Chunhai Kou, ...
BMCBI
2005
121views more  BMCBI 2005»
15 years 4 months ago
Automated methods of predicting the function of biological sequences using GO and BLAST
Background: With the exponential increase in genomic sequence data there is a need to develop automated approaches to deducing the biological functions of novel sequences with hig...
Craig E. Jones, Ute Baumann, Alfred L. Brown
BMCBI
2005
96views more  BMCBI 2005»
15 years 4 months ago
Evaluating eukaryotic secreted protein prediction
Background: Improvements in protein sequence annotation and an increase in the number of annotated protein databases has fueled development of an increasing number of software too...
Eric W. Klee, Lynda B. M. Ellis