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» Predicting When Not to Predict
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169
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JSW
2008
202views more  JSW 2008»
15 years 5 months ago
Change Prediction in Object-Oriented Software Systems: A Probabilistic Approach
An estimation of change-proneness of parts of a software system is an active topic in the area of software engineering. Such estimates can be used to predict changes to different c...
Ali R. Sharafat, Ladan Tahvildari
BMCBI
2005
92views more  BMCBI 2005»
15 years 5 months ago
Predicting functional sites with an automated algorithm suitable for heterogeneous datasets
Background: In a previous report (La et al., Proteins, 2005), we have demonstrated that the identification of phylogenetic motifs, protein sequence fragments conserving the overal...
David La, Dennis R. Livesay
183
Voted
BMCBI
2005
149views more  BMCBI 2005»
15 years 5 months ago
The PD-(D/E)XK superfamily revisited: identification of new members among proteins involved in DNA metabolism and functional pre
Background: The PD-(D/E)XK nuclease superfamily, initially identified in type II restriction endonucleases and later in many enzymes involved in DNA recombination and repair, is o...
Jan Kosinski, Marcin Feder, Janusz M. Bujnicki
BMCBI
2005
141views more  BMCBI 2005»
15 years 5 months ago
A method for the prediction of GPCRs coupling specificity to G-proteins using refined profile Hidden Markov Models
Background: G- Protein coupled receptors (GPCRs) comprise the largest group of eukaryotic cell surface receptors with great pharmacological interest. A broad range of native ligan...
Nikolaos G. Sgourakis, Pantelis G. Bagos, Panagiot...
140
Voted
JCB
2007
144views more  JCB 2007»
15 years 5 months ago
Statistical Estimation of Statistical Mechanical Models: Helix-Coil Theory and Peptide Helicity Prediction
Analysis of biopolymer sequences and structures generally adopts one of two approaches: use of detailed biophysical theoretical models of the system with experimentally-determined...
Scott C. Schmidler, Joseph E. Lucas, Terrence G. O...