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BMCBI
2010
146views more  BMCBI 2010»
14 years 11 months ago
A pairwise residue contact area-based mean force potential for discrimination of native protein structure
Background: Considering energy function to detect a correct protein fold from incorrect ones is very important for protein structure prediction and protein folding. Knowledge-base...
Shahriar Arab, Mehdi Sadeghi, Changiz Eslahchi, Ha...
BMCBI
2007
102views more  BMCBI 2007»
14 years 11 months ago
Setting up a large set of protein-ligand PDB complexes for the development and validation of knowledge-based docking algorithms
Background: The number of algorithms available to predict ligand-protein interactions is large and ever-increasing. The number of test cases used to validate these methods is usua...
Luis A. Diago, Persy Morell, Longendri Aguilera, E...
ISCA
2007
IEEE
103views Hardware» more  ISCA 2007»
15 years 6 months ago
Ginger: control independence using tag rewriting
The negative performance impact of branch mis-predictions can be reduced by exploiting control independence (CI). When a branch mis-predicts, the wrong-path instructions up to the...
Andrew D. Hilton, Amir Roth
CODES
2005
IEEE
15 years 5 months ago
SOMA: a tool for synthesizing and optimizing memory accesses in ASICs
Arbitrary memory dependencies and variable latency memory systems are major obstacles to the synthesis of large-scale ASIC systems in high-level synthesis. This paper presents SOM...
Girish Venkataramani, Tiberiu Chelcea, Seth Copen ...
CASES
2007
ACM
15 years 3 months ago
Performance optimal processor throttling under thermal constraints
We derive analytically, the performance optimal throttling curve for a processor under thermal constraints for a given task sequence. We found that keeping the chip temperature co...
Ravishankar Rao, Sarma B. K. Vrudhula