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» Predicting diverse subsets using structural SVMs
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BMCBI
2007
147views more  BMCBI 2007»
14 years 11 months ago
Improved residue contact prediction using support vector machines and a large feature set
Background: Predicting protein residue-residue contacts is an important 2D prediction task. It is useful for ab initio structure prediction and understanding protein folding. In s...
Jianlin Cheng, Pierre Baldi
BMCBI
2005
151views more  BMCBI 2005»
14 years 11 months ago
stam - a Bioconductor compliant R package for structured analysis of microarray data
Background: Genome wide microarray studies have the potential to unveil novel disease entities. Clinically homogeneous groups of patients can have diverse gene expression profiles...
Claudio Lottaz, Rainer Spang
111
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SIGMOD
2003
ACM
140views Database» more  SIGMOD 2003»
15 years 11 months ago
A Comprehensive XQuery to SQL Translation using Dynamic Interval Encoding
The W3C XQuery language recommendation, based on a hierarchical and ordered document model, supports a wide variety of constructs and use cases. There is a diversity of approaches...
David DeHaan, David Toman, Mariano P. Consens, M. ...
226
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ISBRA
2011
Springer
14 years 3 months ago
Query-Adaptive Ranking with Support Vector Machines for Protein Homology Prediction
Abstract. Protein homology prediction is a crucial step in templatebased protein structure prediction. The functions that rank the proteins in a database according to their homolog...
Yan Fu, Rong Pan, Qiang Yang, Wen Gao
BMCBI
2010
102views more  BMCBI 2010»
14 years 6 months ago
Predicting protein-protein interactions in unbalanced data using the primary structure of proteins
Background: Elucidating protein-protein interactions (PPIs) is essential to constructing protein interaction networks and facilitating our understanding of the general principles ...
Chi-Yuan Yu, Lih-Ching Chou, Darby Tien-Hao Chang