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» Predicting protein folding pathways
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RECOMB
2009
Springer
16 years 5 months ago
Simultaneous Alignment and Folding of Protein Sequences
Abstract. Accurate comparative analysis tools for low-homology proteins remains a difficult challenge in computational biology, especially sequence alignment and consensus folding ...
Bonnie Berger, Charles W. O'Donnell, Jér&oc...
CANDC
2006
ACM
15 years 5 months ago
A comment on "Prediction of protein structural classes by a new measure of information discrepancy"
Protein structural class describes the overall folding type of a protein or its domain. A number of methods were developed to predict protein structural class based on its primary...
Kanaka Durga Kedarisetti, Lukasz A. Kurgan, Scott ...
ISNN
2004
Springer
15 years 10 months ago
Binary Input Encoding Strategy Based Neural Network for Globulin Protein Inter-residue Contacts Map Prediction
Abstract. Inter-residue contacts map prediction is one of the most important intermediate steps to the protein folding problem. In this paper, we focus on protein inter-residue con...
Guang-Zheng Zhang, De-Shuang Huang, Xin Huang
ICML
2005
IEEE
16 years 6 months ago
Predicting protein folds with structural repeats using a chain graph model
Protein fold recognition is a key step towards inferring the tertiary structures from amino-acid sequences. Complex folds such as those consisting of interacting structural repeat...
Yan Liu, Eric P. Xing, Jaime G. Carbonell
CEC
2009
IEEE
15 years 10 months ago
A parallel genetic algorithm for protein folding prediction using the 3D-HP Side Chain model
— This work presents a methodology for the application of a parallel genetic algorithm (PGA) to the problem of protein folding prediction, using the 3DHP-Side Chain model. This m...
César Manuel Vargas Benítez, Heitor ...