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» Predicting protein function from domain content
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BMCBI
2006
169views more  BMCBI 2006»
14 years 9 months ago
Assessing protein similarity with Gene Ontology and its use in subnuclear localization prediction
Background: The accomplishment of the various genome sequencing projects resulted in accumulation of massive amount of gene sequence information. This calls for a large-scale comp...
Zhengdeng Lei, Yang Dai
BIB
2007
82views more  BIB 2007»
14 years 9 months ago
High-throughput modeling and analysis of protein structural dynamics
Protein function is a dynamic property closely related to the conformational mechanisms of protein structure in its physiological environment. To understand and control the functi...
Xiong Liu, Hassan A. Karimi
BMCBI
2010
156views more  BMCBI 2010»
14 years 9 months ago
Protein complex prediction via verifying and reconstructing the topology of domain-domain interactions
Background: High-throughput methods for detecting protein-protein interactions enable us to obtain large interaction networks, and also allow us to computationally identify the as...
Yosuke Ozawa, Rintaro Saito, Shigeo Fujimori, Hisa...
ISBRA
2011
Springer
14 years 27 days ago
Query-Adaptive Ranking with Support Vector Machines for Protein Homology Prediction
Abstract. Protein homology prediction is a crucial step in templatebased protein structure prediction. The functions that rank the proteins in a database according to their homolog...
Yan Fu, Rong Pan, Qiang Yang, Wen Gao
BMCBI
2008
130views more  BMCBI 2008»
14 years 9 months ago
Structural descriptor database: a new tool for sequence-based functional site prediction
Background: The Structural Descriptor Database (SDDB) is a web-based tool that predicts the function of proteins and functional site positions based on the structural properties o...
Juliana S. Bernardes, Jorge H. Fernandez, Ana Tere...