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» Predicting protein function from domain content
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1998
15 years 6 months ago
Phylogenetic Inference in Protein Superfamilies: Analysis of SH2 Domains
This workfocuses on the inference of evolutionary relationships in protein superfamilies, and the uses of these relationships to identify keypositions in the structure, to infer a...
Kimmen Sjölander
BMCBI
2005
120views more  BMCBI 2005»
15 years 5 months ago
pSLIP: SVM based protein subcellular localization prediction using multiple physicochemical properties
Background: Protein subcellular localization is an important determinant of protein function and hence, reliable methods for prediction of localization are needed. A number of pre...
Deepak Sarda, Gek Huey Chua, Kuo-Bin Li, Arun Kris...
NAR
2000
93views more  NAR 2000»
15 years 5 months ago
The SWISS-PROT protein sequence database and its supplement TrEMBL in 2000
SWISS-PROT is a curated protein sequence database which strives to provide a high level of annotation (such as the description of the function of a protein, its domains structure,...
Amos Bairoch, Rolf Apweiler
NAR
2011
194views Computer Vision» more  NAR 2011»
14 years 8 months ago
GreenPhylDB v2.0: comparative and functional genomics in plants
GreenPhylDB is a database designed for comparative and functional genomics based on complete genomes. Version 2 now contains sixteen full genomes of members of the plantae kingdom...
Mathieu Rouard, Valentin Guignon, Christelle Aluom...
BMCBI
2010
102views more  BMCBI 2010»
15 years 12 days ago
Predicting protein-protein interactions in unbalanced data using the primary structure of proteins
Background: Elucidating protein-protein interactions (PPIs) is essential to constructing protein interaction networks and facilitating our understanding of the general principles ...
Chi-Yuan Yu, Lih-Ching Chou, Darby Tien-Hao Chang