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» Predicting protein functions with message passing algorithms
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ICAI
2007
14 years 11 months ago
A Graphical Game Model of Drug Binding
Abstract Drug-protein binding is the reversible interaction of drugs with proteins in an organism and is vital in helping the body reject invading pathogenic organisms. Predicting ...
Christina Boucher, Maja Omanovic
BMCBI
2008
130views more  BMCBI 2008»
14 years 9 months ago
A database of phylogenetically atypical genes in archaeal and bacterial genomes, identified using the DarkHorse algorithm
Background: The process of horizontal gene transfer (HGT) is believed to be widespread in Bacteria and Archaea, but little comparative data is available addressing its occurrence ...
Sheila Podell, Terry Gaasterland, Eric E. Allen
BMCBI
2006
107views more  BMCBI 2006»
14 years 9 months ago
A reinforced merging methodology for mapping unique peptide motifs in members of protein families
Background: Members of a protein family often have highly conserved sequences; most of these sequences carry identical biological functions and possess similar three-dimensional (...
Hao-Teng Chang, Tun-Wen Pai, Tan-Chi Fan, Bo-Han S...
RECOMB
2006
Springer
15 years 10 months ago
Integrated Protein Interaction Networks for 11 Microbes
We have combined four different types of functional genomic data to create high coverage protein interaction networks for 11 microbes. Our integration algorithm naturally handles s...
Balaji S. Srinivasan, Antal F. Novak, Jason Flanni...
CVPR
2009
IEEE
16 years 4 months ago
Minimizing Sparse Higher Order Energy Functions of Discrete Variables
Higher order energy functions have the ability to encode high level structural dependencies between pixels, which have been shown to be extremely powerful for image labeling pro...
Carsten Rother (Microsoft Research Cambridge), Pus...