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» Predicting protein functions with message passing algorithms
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WDAG
2009
Springer
160views Algorithms» more  WDAG 2009»
15 years 2 months ago
Brief Announcement: The Minimum Failure Detector for Non-Local Tasks in Message-Passing Systems
This paper defines the basic notions of local and non-local tasks, and determines the minimum information about failures that is necessary to solve any non-local task in message-p...
Carole Delporte-Gallet, Hugues Fauconnier, Sam Tou...
WOB
2008
101views Bioinformatics» more  WOB 2008»
14 years 11 months ago
Top-Down Hierarchical Ensembles of Classifiers for Predicting G-Protein-Coupled-Receptor Functions
Abstract. Despite the recent advances in Molecular Biology, the function of a large amount of proteins is still unknown. An approach that can be used in the prediction of a protein...
Eduardo P. Costa, Ana Carolina Lorena, André...
BMCBI
2010
116views more  BMCBI 2010»
14 years 9 months ago
Optimization algorithms for functional deimmunization of therapeutic proteins
Background: To develop protein therapeutics from exogenous sources, it is necessary to mitigate the risks of eliciting an anti-biotherapeutic immune response. A key aspect of the ...
Andrew S. Parker, Wei Zheng, Karl E. Griswold, Chr...
BIOCOMP
2006
14 years 11 months ago
A New Algorithm to Predict the Active Sites Using Amino Acid Vectors and Biochemical features of Surface Patches
: It is a very active research field to predict protein functions and active sites by protein surface patches. It is especially challengeable to predict the active sites by structu...
Sunshin Kim, Chung Rhee, Jungdo Choi, Yong Je Chun...
BMCBI
2008
117views more  BMCBI 2008»
14 years 9 months ago
A probabilistic framework to predict protein function from interaction data integrated with semantic knowledge
Background: The functional characterization of newly discovered proteins has been a challenge in the post-genomic era. Protein-protein interactions provide insights into the funct...
Young-Rae Cho, Lei Shi, Murali Ramanathan, Aidong ...