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» Predicting the Effects of Gene Deletion
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KDD
2003
ACM
190views Data Mining» more  KDD 2003»
16 years 4 days ago
Distance-enhanced association rules for gene expression
We introduce a novel data mining technique for the analysis of gene expression. Gene expression is the effective production of the protein that a gene encodes. We focus on the cha...
Aleksandar Icev, Carolina Ruiz, Elizabeth F. Ryder
BMCBI
2004
91views more  BMCBI 2004»
14 years 11 months ago
SIGI: score-based identification of genomic islands
Background: Genomic islands can be observed in many microbial genomes. These stretches of DNA have a conspicuous composition with regard to sequence or encoded functions. Genomic ...
Rainer Merkl
ICPP
2007
IEEE
15 years 6 months ago
A Meta-Learning Failure Predictor for Blue Gene/L Systems
The demand for more computational power in science and engineering has spurred the design and deployment of ever-growing cluster systems. Even though the individual components use...
Prashasta Gujrati, Yawei Li, Zhiling Lan, Rajeev T...
BMCBI
2005
79views more  BMCBI 2005»
14 years 11 months ago
Mathematical design of prokaryotic clone-based microarrays
Background: Clone-based microarrays, on which each spot represents a random genomic fragment, are a good alternative to open reading frame-based microarrays, especially for microo...
Bart Pieterse, Elisabeth J. Quirijns, Frank H. J. ...
BMCBI
2006
130views more  BMCBI 2006»
14 years 11 months ago
An accurate and interpretable model for siRNA efficacy prediction
Background: The use of exogenous small interfering RNAs (siRNAs) for gene silencing has quickly become a widespread molecular tool providing a powerful means for gene functional s...
Jean-Philippe Vert, Nicolas Foveau, Christian Laja...