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BMCBI
2008
130views more  BMCBI 2008»
15 years 5 months ago
Function approximation approach to the inference of reduced NGnet models of genetic networks
Background: The inference of a genetic network is a problem in which mutual interactions among genes are deduced using time-series of gene expression patterns. While a number of m...
Shuhei Kimura, Katsuki Sonoda, Soichiro Yamane, Hi...
153
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ICANNGA
2007
Springer
100views Algorithms» more  ICANNGA 2007»
15 years 9 months ago
Softening Splits in Decision Trees Using Simulated Annealing
Predictions computed by a classification tree are usually constant on axis-parallel hyperrectangles corresponding to the leaves and have strict jumps on their boundaries. The densi...
Jakub Dvorák, Petr Savický
BMCBI
2008
173views more  BMCBI 2008»
15 years 5 months ago
Improved machine learning method for analysis of gas phase chemistry of peptides
Background: Accurate peptide identification is important to high-throughput proteomics analyses that use mass spectrometry. Search programs compare fragmentation spectra (MS/MS) o...
Allison Gehrke, Shaojun Sun, Lukasz A. Kurgan, Nat...
NAR
2002
132views more  NAR 2002»
15 years 4 months ago
euGenes: a eukaryote genome information system
euGenes is a genome information system and database that provides a common summary of eukaryote genes and genomes, at web site http://iubio.bio.indiana.edu/eugenes/. Seven popular...
Donald G. Gilbert
CORR
2010
Springer
177views Education» more  CORR 2010»
15 years 5 months ago
Supervised Random Walks: Predicting and Recommending Links in Social Networks
Predicting the occurrence of links is a fundamental problem in networks. In the link prediction problem we are given a snapshot of a network and would like to infer which interact...
Lars Backstrom, Jure Leskovec