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» Prediction of protein structural class with Rough Sets
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BMCBI
2008
110views more  BMCBI 2008»
14 years 9 months ago
Enhancing the prediction of protein pairings between interacting families using orthology information
Background: It has repeatedly been shown that interacting protein families tend to have similar phylogenetic trees. These similarities can be used to predicting the mapping betwee...
José M. G. Izarzugaza, David de Juan, Carle...
BMCBI
2007
129views more  BMCBI 2007»
14 years 9 months ago
Exploring inconsistencies in genome-wide protein function annotations: a machine learning approach
Background: Incorrectly annotated sequence data are becoming more commonplace as databases increasingly rely on automated techniques for annotation. Hence, there is an urgent need...
Carson M. Andorf, Drena Dobbs, Vasant Honavar
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BMCBI
2006
165views more  BMCBI 2006»
14 years 9 months ago
Improving the quality of protein structure models by selecting from alignment alternatives
Background: In the area of protein structure prediction, recently a lot of effort has gone into the development of Model Quality Assessment Programs (MQAPs). MQAPs distinguish hig...
Ingolf Sommer, Stefano Toppo, Oliver Sander, Thoma...
ISMB
1994
14 years 11 months ago
Optimally Parsing a Sequence into Different Classes Based on Multiple Types of Evidence
Weconsider the problem of parsing a sequence into different classes of subsequences.Twocommonexamplesare finding the exons and introns in genomicsequences and identifying the seco...
Gary D. Stormo, David Haussler
AMC
2008
87views more  AMC 2008»
14 years 9 months ago
Mining classification rules with Reduced MEPAR-miner Algorithm
In this study, a new classification technique based on rough set theory and MEPAR-miner algorithm for association rule mining is introduced. Proposed method is called as `Reduced ...
Emel Kizilkaya Aydogan, Cevriye Gencer