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» Prediction of protein structural class with Rough Sets
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BMCBI
2005
87views more  BMCBI 2005»
14 years 9 months ago
ProfNet, a method to derive profile-profile alignment scoring functions that improves the alignments of distantly related protei
Background: Profile-profile methods have been used for some years now to detect and align homologous proteins. The best such methods use information from the background distributi...
Tomas Ohlson, Arne Elofsson
BMCBI
2010
150views more  BMCBI 2010»
14 years 9 months ago
Evolutionary rates at codon sites may be used to align sequences and infer protein domain function
Background: Sequence alignments form part of many investigations in molecular biology, including the determination of phylogenetic relationships, the prediction of protein structu...
Pierre M. Durand, Scott Hazelhurst, Theresa L. Coe...
93
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ISPA
2007
Springer
15 years 3 months ago
Grid and Distributed Public Computing Schemes for Structural Proteomics: A Short Overview
Grid and distributed public computing schemes has become an essential tool for many scientific fields including bioinformatics, computational biology and systems biology. The adopt...
Azhar Ali Shah, Daniel Barthel, Natalio Krasnogor
COLT
2008
Springer
14 years 11 months ago
Does Unlabeled Data Provably Help? Worst-case Analysis of the Sample Complexity of Semi-Supervised Learning
We study the potential benefits to classification prediction that arise from having access to unlabeled samples. We compare learning in the semi-supervised model to the standard, ...
Shai Ben-David, Tyler Lu, Dávid Pál
92
Voted
BMCBI
2007
156views more  BMCBI 2007»
14 years 9 months ago
Accuracy of structure-based sequence alignment of automatic methods
Background: Accurate sequence alignments are essential for homology searches and for building three-dimensional structural models of proteins. Since structure is better conserved ...
Changhoon Kim, Byungkook Lee