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» Prediction of protein structural class with Rough Sets
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83
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BMCBI
2007
116views more  BMCBI 2007»
14 years 9 months ago
MED: a new non-supervised gene prediction algorithm for bacterial and archaeal genomes
Background: Despite a remarkable success in the computational prediction of genes in Bacteria and Archaea, a lack of comprehensive understanding of prokaryotic gene structures pre...
Huaiqiu Zhu, Gang-Qing Hu, Yi-Fan Yang, Jin Wang, ...
81
Voted
BMCBI
2008
101views more  BMCBI 2008»
14 years 9 months ago
Reranking candidate gene models with cross-species comparison for improved gene prediction
Background: Most gene finders score candidate gene models with state-based methods, typically HMMs, by combining local properties (coding potential, splice donor and acceptor patt...
Qian Liu, Koby Crammer, Fernando C. N. Pereira, Da...
81
Voted
BMCBI
2006
94views more  BMCBI 2006»
14 years 9 months ago
Novel knowledge-based mean force potential at the profile level
Background: The development and testing of functions for the modeling of protein energetics is an important part of current research aimed at understanding protein structure and f...
Qiwen Dong, Xiaolong Wang, Lei Lin
BMCBI
2008
104views more  BMCBI 2008»
14 years 9 months ago
Evolutionary Pareto-optimization of stably folding peptides
Background: As a rule, peptides are more flexible and unstructured than proteins with their substantial stabilizing hydrophobic cores. Nevertheless, a few stably folding peptides ...
Wolfram Gronwald, Tim Hohm, Daniel Hoffmann
TFS
2011
194views Education» more  TFS 2011»
14 years 4 months ago
Top-Down Induction of Fuzzy Pattern Trees
Fuzzy pattern tree induction was recently introduced as a novel machine learning method for classification. Roughly speaking, a pattern tree is a hierarchical, tree-like structur...
R. Senge, Eyke Hüllermeier