Knowing the number of residue contacts in a protein is crucial for deriving constraints useful in modeling protein folding, protein structure, and/or scoring remote homology searc...
This paper presents a new Genetic Algorithm for Protein Structure Prediction problem in both 2D and 3D hydrophobichydrophilic lattice models, introduced in [1]. Our algorithm evol...
The partDSA package (Molinaro, Lostritto, and Weston 2009) provides a novel recursive partitioning tool for prediction when numerous variables jointly affect the outcome. In such ...
Annette M. Molinaro, Karen Lostritto, Mark J. van ...
Background: Identifying cis-regulatory elements is crucial to understanding gene expression, which highlights the importance of the computational detection of overrepresented tran...
Abstract This paper proposes an approach for reducing the computational complexity of a model-predictive-control strategy for discrete-time hybrid systems with discrete inputs only...
Bostjan Potocnik, Gasper Music, Igor Skrjanc, Boru...