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BMCBI
2008
168views more  BMCBI 2008»
14 years 11 months ago
Predicting protein folding pathways at the mesoscopic level based on native interactions between secondary structure elements
Background: Since experimental determination of protein folding pathways remains difficult, computational techniques are often used to simulate protein folding. Most current techn...
Qingwu Yang, Sing-Hoi Sze
98
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KDD
2004
ACM
198views Data Mining» more  KDD 2004»
15 years 4 months ago
Mining traffic data from probe-car system for travel time prediction
We are developing a technique to predict travel time of a vehicle for an objective road section, based on real time traffic data collected through a probe-car system. In the area ...
Takayuki Nakata, Jun-ichi Takeuchi
BMCBI
2008
118views more  BMCBI 2008»
14 years 11 months ago
Evaluation of phylogenetic footprint discovery for predicting bacterial cis-regulatory elements and revealing their evolution
Background: The detection of conserved motifs in promoters of orthologous genes (phylogenetic footprints) has become a common strategy to predict cis-acting regulatory elements. S...
Rekin's Janky, Jacques van Helden
IJCAI
2007
15 years 10 days ago
Utile Distinctions for Relational Reinforcement Learning
We introduce an approach to autonomously creating state space abstractions for an online reinforcement learning agent using a relational representation. Our approach uses a tree-b...
William Dabney, Amy McGovern
CSB
2005
IEEE
128views Bioinformatics» more  CSB 2005»
15 years 26 days ago
Application of a Generalized MWC Model for the Mathematical Simulation of Metabolic Pathways Regulated by Allosteric Enzymes
In our effort to elucidate the systems biology of the model organism, Escherichia coli, we have developed a mathematical model that simulates the allosteric regulation for threoni...
Tarek S. Najdi, Chin-Rang Yang, Bruce E. Shapiro, ...