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BMCBI
2006
180views more  BMCBI 2006»
15 years 6 months ago
The Gaggle: An open-source software system for integrating bioinformatics software and data sources
Background: Systems biologists work with many kinds of data, from many different sources, using a variety of software tools. Each of these tools typically excels at one type of an...
Paul T. Shannon, David J. Reiss, Richard Bonneau, ...
BMCBI
2006
112views more  BMCBI 2006»
15 years 6 months ago
A correlated motif approach for finding short linear motifs from protein interaction networks
Background: An important class of interaction switches for biological circuits and disease pathways are short binding motifs. However, the biological experiments to find these bin...
Soon-Heng Tan, Hugo Willy, Wing-Kin Sung, See-Kion...
BMCBI
2006
127views more  BMCBI 2006»
15 years 6 months ago
A graph-search framework for associating gene identifiers with documents
Background: One step in the model organism database curation process is to find, for each article, the identifier of every gene discussed in the article. We consider a relaxation ...
William W. Cohen, Einat Minkov
COMGEO
2006
ACM
15 years 6 months ago
Octrees with near optimal cost for ray-shooting
Predicting and optimizing the performance of ray shooting is a very important problem in computer graphics due to the severe computational demands of ray tracing and other applica...
Hervé Brönnimann, Marc Glisse
COR
2006
82views more  COR 2006»
15 years 6 months ago
Batching work and rework processes with limited deterioration of reworkables
We study the problem of planning the production of new and recovering defective items of the same product manufactured on the same facility. Items of the product are produced in b...
Karl Inderfurth, Adam Janiak, Mikhail Y. Kovalyov,...
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