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ICML
2004
IEEE
16 years 4 months ago
Learning associative Markov networks
Markov networks are extensively used to model complex sequential, spatial, and relational interactions in fields as diverse as image processing, natural language analysis, and bio...
Benjamin Taskar, Vassil Chatalbashev, Daphne Kolle...
RECOMB
2006
Springer
16 years 3 months ago
Inferring Gene Orders from Gene Maps Using the Breakpoint Distance
Abstract. Preliminary to most comparative genomics studies is the annotation of chromosomes as ordered sequences of genes. Unfortunately, different genetic mapping techniques usual...
Guillaume Blin, Eric Blais, Pierre Guillon, Mathie...
RECOMB
2005
Springer
16 years 3 months ago
Lower Bounds for Maximum Parsimony with Gene Order Data
Abstract. In this paper, we study lower bound techniques for branchand-bound algorithms for maximum parsimony, with a focus on gene order data. We give a simple O(n3 ) time dynamic...
Abraham Bachrach, Kevin Chen, Chris Harrelson, Rad...
DCC
2003
IEEE
16 years 2 months ago
Optimal Alphabet Partitioning for Semi-Adaptive Coding of Sources of Unknown Sparse Distributions
Practical applications that employ entropy coding for large alphabets often partition the alphabet set into two or more layers and encode each symbol by using some suitable prefix...
Dan Chen, Yi-Jen Chiang, Nasir D. Memon, Xiaolin W...
CGO
2010
IEEE
15 years 10 months ago
Parameterized tiling revisited
Tiling, a key transformation for optimizing programs, has been widely studied in literature. Parameterized tiled code is important for auto-tuning systems since they often execute...
Muthu Manikandan Baskaran, Albert Hartono, Sanket ...