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» Probabilistic Graphical Models and their Role in Databases
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2005
ACM
15 years 2 months ago
ClawHMMER: A Streaming HMMer-Search Implementation
The proliferation of biological sequence data has motivated the need for an extremely fast probabilistic sequence search. One method for performing this search involves evaluating...
Daniel Reiter Horn, Mike Houston, Pat Hanrahan
ICDE
2011
IEEE
207views Database» more  ICDE 2011»
14 years 1 months ago
Monte Carlo query processing of uncertain multidimensional array data
— Array database systems are architected for scientific and engineering applications. In these applications, the value of a cell is often imprecise and uncertain. There are at le...
Tingjian Ge, David Grabiner, Stanley B. Zdonik
ER
2007
Springer
130views Database» more  ER 2007»
15 years 3 months ago
Towards Automated Reasoning on ORM Schemes
The goal of this article is to formalize Object Role Modeling (ORM) using the DLR description logic. This would enable automated reasoning on the formal properties of ORM diagrams,...
Mustafa Jarrar
KDD
2007
ACM
167views Data Mining» more  KDD 2007»
15 years 9 months ago
Generalized component analysis for text with heterogeneous attributes
We present a class of richly structured, undirected hidden variable models suitable for simultaneously modeling text along with other attributes encoded in different modalities. O...
Xuerui Wang, Chris Pal, Andrew McCallum
ALMOB
2008
95views more  ALMOB 2008»
14 years 9 months ago
A stitch in time: Efficient computation of genomic DNA melting bubbles
Background: It is of biological interest to make genome-wide predictions of the locations of DNA melting bubbles using statistical mechanics models. Computationally, this poses th...
Eivind Tøstesen