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» Probabilistic matrix tri-factorization
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RECOMB
2002
Springer
15 years 12 months ago
Discovering local structure in gene expression data: the order-preserving submatrix problem
This paper concerns the discovery of patterns in gene expression matrices, in which each element gives the expression level of a given gene in a given experiment. Most existing me...
Amir Ben-Dor, Benny Chor, Richard M. Karp, Zohar Y...
112
Voted
BMCBI
2010
153views more  BMCBI 2010»
14 years 11 months ago
Metamotifs - a generative model for building families of nucleotide position weight matrices
Background: Development of high-throughput methods for measuring DNA interactions of transcription factors together with computational advances in short motif inference algorithms...
Matias Piipari, Thomas A. Down, Tim J. P. Hubbard
BMCBI
2004
150views more  BMCBI 2004»
14 years 11 months ago
Cross-species comparison significantly improves genome-wide prediction of cis-regulatory modules in Drosophila
Background: The discovery of cis-regulatory modules in metazoan genomes is crucial for understanding the connection between genes and organism diversity. It is important to quanti...
Saurabh Sinha, Mark D. Schroeder, Ulrich Unnerstal...
114
Voted
SDM
2011
SIAM
223views Data Mining» more  SDM 2011»
14 years 2 months ago
Characterizing Uncertain Data using Compression
Motivated by sensor networks, mobility data, biology and life sciences, the area of mining uncertain data has recently received a great deal of attention. While various papers hav...
Francesco Bonchi, Matthijs van Leeuwen, Antti Ukko...
121
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ICMLA
2010
14 years 9 months ago
A Probabilistic Graphical Model of Quantum Systems
Quantum systems are promising candidates of future computing and information processing devices. In a large system, information about the quantum states and processes may be incomp...
Chen-Hsiang Yeang