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TCBB
2008
113views more  TCBB 2008»
15 years 1 months ago
Efficient Algorithms for the Computational Design of Optimal Tiling Arrays
The representation of a genome by oligonucleotide probes is a prerequisite for the analysis of many of its basic properties, such as transcription factor binding sites, chromosomal...
Alexander Schliep, Roland Krause
IJHPCA
2007
88views more  IJHPCA 2007»
15 years 1 months ago
Performance Optimization and Modeling of Blocked Sparse Kernels
We present a method for automatically selecting optimal implementations of sparse matrixvector operations. Our software ‘AcCELS’ (Accelerated Compress-storage Elements for Lin...
Alfredo Buttari, Victor Eijkhout, Julien Langou, S...
CLUSTER
2002
IEEE
15 years 6 months ago
High Performance User Level Sockets over Gigabit Ethernet
While a number of User-Level Protocols have been developed to reduce the gap between the performance capabilities of the physical network and the performance actually available, a...
Pavan Balaji, Piyush Shivam, Pete Wyckoff, Dhabale...
NOMS
2006
IEEE
169views Communications» more  NOMS 2006»
15 years 7 months ago
Real-Time Measurement of End-to-End Available Bandwidth using Kalman Filtering
—This paper presents a new method, BART (Bandwidth Available in Real-Time), for estimating the end-toend available bandwidth over a network path. It estimates bandwidth quasi-con...
Svante Ekelin, Martin Nilsson, Erik Hartikainen, A...
IPPS
1998
IEEE
15 years 5 months ago
PULC: ParaStation User-Level Communication. Design and Overview
PULC is a user-level communication library for workstation clusters. PULC provides a multi-user, multi-programming communication library for user level communication on top of high...
Joachim M. Blum, Thomas M. Warschko, Walter F. Tic...