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BMCBI
2005
251views more  BMCBI 2005»
13 years 6 months ago
Contextual weighting for Support Vector Machines in literature mining: an application to gene versus protein name disambiguation
Background: The ability to distinguish between genes and proteins is essential for understanding biological text. Support Vector Machines (SVMs) have been proven to be very effici...
Tapio Pahikkala, Filip Ginter, Jorma Boberg, Jouni...
TPDS
2008
124views more  TPDS 2008»
13 years 6 months ago
TROP: A Novel Approximate Link-State Dissemination Framework For Dynamic Survivable Routing in MPLS Networks
In this paper, a novel approximate link-state dissemination framework, called TROP, is proposed for shared backup path protection (SBPP) in Multi-Protocol Label Switching (MPLS) ne...
János Tapolcai, Pin-Han Ho, Anwar Haque
COLING
2002
13 years 6 months ago
Creating a Finite-State Parser with Application Semantics
Parsli is a finite-state (FS) parser which can be tailored to the lexicon, syntax, and semantics of a particular application using a hand-editable declarative lexicon. The lexicon...
Owen Rambow, Srinivas Bangalore, Tahir Butt, Alexi...
BMCBI
2011
13 years 23 days ago
Multithreaded comparative RNA secondary structure prediction using stochastic context-free grammars
Background: The prediction of the structure of large RNAs remains a particular challenge in bioinformatics, due to the computational complexity and low levels of accuracy of state...
Zsuzsanna Sukosd, Bjarne Knudsen, Morten Vaerum, J...
BMCBI
2011
12 years 9 months ago
Inference of Chromosome-Specific Copy Numbers Using Population Haplotypes
Background: Using microarray and sequencing platforms, a large number of copy number variations (CNVs) have been identified in humans. In practice, because our human genome is a d...
Yao-Ting Huang, Min-Han Wu