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89
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BMCBI
2007
146views more  BMCBI 2007»
14 years 10 months ago
Bayesian hierarchical model for transcriptional module discovery by jointly modeling gene expression and ChIP-chip data
Background: Transcriptional modules (TM) consist of groups of co-regulated genes and transcription factors (TF) regulating their expression. Two high-throughput (HT) experimental ...
Xiangdong Liu, Walter J. Jessen, Siva Sivaganesan,...
BMCBI
2005
137views more  BMCBI 2005»
14 years 10 months ago
A standard curve based method for relative real time PCR data processing
Background: Currently real time PCR is the most precise method by which to measure gene expression. The method generates a large amount of raw numerical data and processing may no...
Alexey Larionov, Andreas Krause, William Miller
77
Voted
ICCAD
2001
IEEE
192views Hardware» more  ICCAD 2001»
15 years 7 months ago
BOOM - A Heuristic Boolean Minimizer
We present a two-level Boolean minimization tool (BOOM) based on a new implicant generation paradigm. In contrast to all previous minimization methods, where the implicants are ge...
Jan Hlavicka, Petr Fiser
APLAS
2006
ACM
15 years 4 months ago
Scheme with Classes, Mixins, and Traits
Abstract. The Scheme language report advocates language design as the composition of a small set of orthogonal constructs, instead of a large accumulation of features. In this pape...
Matthew Flatt, Robert Bruce Findler, Matthias Fell...
IJCAI
2001
14 years 11 months ago
Solving Non-Boolean Satisfiability Problems with Stochastic Local Search
Much excitement has been generated by the success of stochastic local search procedures at finding solutions to large, very hard satisfiability problems. Many of the problems on wh...
Alan M. Frisch, Timothy J. Peugniez