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    BMCBI
    2008
    103views more  BMCBI 2008»
    Detection of protein catalytic residues at high precision using local network properties
    14 years 10 months ago
    Detection of protein catalytic residues at high precision using local network properties
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    Background: Identifying the active site of an enzyme is a crucial step in functional studies. While protein sequences and structures can be experimentally characterized, determini...
    Patrick Slama, Ioannis Filippis, Michael Lappe
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    BMCBI
    2008
    91views more  BMCBI 2008»
    Presenting and exploring biological pathways with PathVisio
    14 years 10 months ago
    Presenting and exploring biological pathways with PathVisio
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    nd: Biological pathways are a useful abstraction of biological concepts, and software tools to deal with pathway diagrams can help biological research. PathVisio is a new visualiz...
    Martijn P. van Iersel, Thomas Kelder, Alexander R....
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    BMCBI
    2008
    121views more  BMCBI 2008»
    ReAlignerV: Web-based genomic alignment tool with high specificity and robustness estimated by species-specific insertion sequen
    14 years 10 months ago
    ReAlignerV: Web-based genomic alignment tool with high specificity and robustness estimated by species-specific insertion sequen
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    Background: Detecting conserved noncoding sequences (CNSs) across species highlights the functional elements. Alignment procedures combined with computational prediction of transc...
    Hisakazu Iwama, Yukio Hori, Kensuke Matsumoto, Koj...
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    BMCBI
    2008
    142views more  BMCBI 2008»
    Optimal neighborhood indexing for protein similarity search
    14 years 10 months ago
    Optimal neighborhood indexing for protein similarity search
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    Background: Similarity inference, one of the main bioinformatics tasks, has to face an exponential growth of the biological data. A classical approach used to cope with this data ...
    Pierre Peterlongo, Laurent Noé, Dominique L...
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    BMCBI
    2008
    151views more  BMCBI 2008»
    An integrated database-pipeline system for studying single nucleotide polymorphisms and diseases
    14 years 10 months ago
    An integrated database-pipeline system for studying single nucleotide polymorphisms and diseases
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    Background: Studies on the relationship between disease and genetic variations such as single nucleotide polymorphisms (SNPs) are important. Genetic variations can cause disease b...
    Jin Ok Yang, Sohyun Hwang, Jeongsu Oh, Jong Bhak, ...
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