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» Program Analysis Using Symbolic Ranges
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CMSB
2008
Springer
14 years 11 months ago
Analyzing a Discrete Model of Aplysia Central Pattern Generator
We present a discrete formal model of the central pattern generator (CPG) located in the buccal ganglia of Aplysia that is responsible for mediating the rhythmic movements of its f...
Ashish Tiwari, Carolyn L. Talcott
BMCBI
2010
108views more  BMCBI 2010»
14 years 9 months ago
iGTP: A software package for large-scale gene tree parsimony analysis
Background: The ever-increasing wealth of genomic sequence information provides an unprecedented opportunity for large-scale phylogenetic analysis. However, species phylogeny infe...
Ruchi Chaudhary, Mukul S. Bansal, André Weh...
BMCBI
2010
136views more  BMCBI 2010»
14 years 9 months ago
Protein structure analysis of mutations causing inheritable diseases. An e-Science approach with life scientist friendly interfa
Background: Many newly detected point mutations are located in protein-coding regions of the human genome. Knowledge of their effects on the protein's 3D structure provides i...
Hanka Venselaar, Tim A. H. te Beek, Remko K. P. Ku...
BMCBI
2010
137views more  BMCBI 2010»
14 years 9 months ago
Improving pairwise sequence alignment accuracy using near-optimal protein sequence alignments
Background: While the pairwise alignments produced by sequence similarity searches are a powerful tool for identifying homologous proteins - proteins that share a common ancestor ...
Michael L. Sierk, Michael E. Smoot, Ellen J. Bass,...
IWMM
2000
Springer
113views Hardware» more  IWMM 2000»
15 years 1 months ago
On the Effectiveness of GC in Java
We study the effectiveness of garbage collection (GC) algorithms by measuring the time difference between the actual collection time of an object and the potential earliest collec...
Ran Shaham, Elliot K. Kolodner, Shmuel Sagiv