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BMCBI
2007
147views more  BMCBI 2007»
14 years 9 months ago
MaxAlign: maximizing usable data in an alignment
Background: The presence of gaps in an alignment of nucleotide or protein sequences is often an inconvenience for bioinformatical studies. In phylogenetic and other analyses, for ...
Rodrigo Gouveia-Oliveira, Peter Wad Sackett, Ander...
CORR
2006
Springer
141views Education» more  CORR 2006»
14 years 9 months ago
Ideas by Statistical Mechanics (ISM)
Ideas by Statistical Mechanics (ISM) is a generic program to model evolution and propagation of ideas/patterns throughout populations subjected to endogenous and exogenous interac...
Lester Ingber
BMCBI
2007
148views more  BMCBI 2007»
14 years 9 months ago
fREDUCE: Detection of degenerate regulatory elements using correlation with expression
Background: The precision of transcriptional regulation is made possible by the specificity of physical interactions between transcription factors and their cognate binding sites ...
Randy Z. Wu, Christina Chaivorapol, Jiashun Zheng,...
CASES
2010
ACM
14 years 7 months ago
Implementing virtual secure circuit using a custom-instruction approach
Although cryptographic algorithms are designed to resist at least thousands of years of cryptoanalysis, implementing them with either software or hardware usually leaks additional...
Zhimin Chen, Ambuj Sinha, Patrick Schaumont
92
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PPOPP
2012
ACM
13 years 5 months ago
Internally deterministic parallel algorithms can be fast
The virtues of deterministic parallelism have been argued for decades and many forms of deterministic parallelism have been described and analyzed. Here we are concerned with one ...
Guy E. Blelloch, Jeremy T. Fineman, Phillip B. Gib...