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BIBM
2008
IEEE
110views Bioinformatics» more  BIBM 2008»
15 years 5 months ago
Genome Alignments Using MPI-LAGAN
We develop a parallel algorithm for a widely used whole genome alignment method called LAGAN. We use the MPI-based protocol to develop parallel solutions for two phases of the alg...
Ruinan Zhang, Huzefa Rangwala, George Karypis
DATE
2008
IEEE
122views Hardware» more  DATE 2008»
15 years 5 months ago
Simulation-Directed Invariant Mining for Software Verification
With the advance of SAT solvers, transforming a software program to a propositional formula has generated much interest for bounded model checking of software in recent years. How...
Xueqi Cheng, Michael S. Hsiao
IEEEPACT
2008
IEEE
15 years 5 months ago
Mars: a MapReduce framework on graphics processors
We design and implement Mars, a MapReduce framework, on graphics processors (GPUs). MapReduce is a distributed programming framework originally proposed by Google for the ease of ...
Bingsheng He, Wenbin Fang, Qiong Luo, Naga K. Govi...
DATE
2007
IEEE
99views Hardware» more  DATE 2007»
15 years 5 months ago
Instruction trace compression for rapid instruction cache simulation
Modern Application Specific Instruction Set Processors (ASIPs) have customizable caches, where the size, associativity and line size can all be customized to suit a particular ap...
Andhi Janapsatya, Aleksandar Ignjatovic, Sri Param...
PLDI
2006
ACM
15 years 5 months ago
LOCKSMITH: context-sensitive correlation analysis for race detection
One common technique for preventing data races in multi-threaded programs is to ensure that all accesses to shared locations are consistently protected by a lock. We present a too...
Polyvios Pratikakis, Jeffrey S. Foster, Michael W....