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IPPS
2009
IEEE
15 years 5 months ago
Evaluating the use of GPUs in liver image segmentation and HMMER database searches
In this paper we present the results of parallelizing two life sciences applications, Markov random fieldsbased (MRF) liver segmentation and HMMER’s Viterbi algorithm, using GP...
John Paul Walters, Vidyananth Balu, Suryaprakash K...
IPPS
2009
IEEE
15 years 5 months ago
Designing multi-leader-based Allgather algorithms for multi-core clusters
The increasing demand for computational cycles is being met by the use of multi-core processors. Having large number of cores per node necessitates multi-core aware designs to ext...
Krishna Chaitanya Kandalla, Hari Subramoni, Gopala...
IPPS
2009
IEEE
15 years 5 months ago
Accelerating error correction in high-throughput short-read DNA sequencing data with CUDA
Emerging DNA sequencing technologies open up exciting new opportunities for genome sequencing by generating read data with a massive throughput. However, produced reads are signif...
Haixiang Shi, Bertil Schmidt, Weiguo Liu, Wolfgang...
ISCA
2009
IEEE
178views Hardware» more  ISCA 2009»
15 years 5 months ago
Thread motion: fine-grained power management for multi-core systems
Dynamic voltage and frequency scaling (DVFS) is a commonly-used powermanagement scheme that dynamically adjusts power and performance to the time-varying needs of running programs...
Krishna K. Rangan, Gu-Yeon Wei, David Brooks
CIKM
2009
Springer
15 years 5 months ago
Packing the most onto your cloud
Parallel dataflow programming frameworks such as Map-Reduce are increasingly being used for large scale data analysis on computing clouds. It is therefore becoming important to a...
Ashraf Aboulnaga, Ziyu Wang, Zi Ye Zhang