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SCFBM
2008
92views more  SCFBM 2008»
14 years 10 months ago
CRANKITE: A fast polypeptide backbone conformation sampler
Background: CRANKITE is a suite of programs for simulating backbone conformations of polypeptides and proteins. The core of the suite is an efficient Metropolis Monte Carlo sample...
Alexei A. Podtelezhnikov, David L. Wild
WABI
2010
Springer
128views Bioinformatics» more  WABI 2010»
14 years 9 months ago
Sparsification of RNA Structure Prediction Including Pseudoknots
Background: Although many RNA molecules contain pseudoknots, computational prediction of pseudoknotted RNA structure is still in its infancy due to high running time and space con...
Mathias Möhl, Raheleh Salari, Sebastian Will,...
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SIGSOFT
2010
ACM
14 years 8 months ago
Scalable SMT-based verification of GPU kernel functions
Interest in Graphical Processing Units (GPUs) is skyrocketing due to their potential to yield spectacular performance on many important computing applications. Unfortunately, writ...
Guodong Li, Ganesh Gopalakrishnan
JSA
2010
173views more  JSA 2010»
14 years 5 months ago
Hardware/software support for adaptive work-stealing in on-chip multiprocessor
During the past few years, embedded digital systems have been requested to provide a huge amount of processing power and functionality. A very likely foreseeable step to pursue th...
Quentin L. Meunier, Frédéric P&eacut...
ASPLOS
2011
ACM
14 years 2 months ago
Improving the performance of trace-based systems by false loop filtering
Trace-based compilation is a promising technique for language compilers and binary translators. It offers the potential to expand the compilation scopes that have traditionally be...
Hiroshige Hayashizaki, Peng Wu, Hiroshi Inoue, Mau...