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BMCBI
2002
108views more  BMCBI 2002»
15 years 1 months ago
A memory-efficient dynamic programming algorithm for optimal alignment of a sequence to an RNA secondary structure
Background: Covariance models (CMs) are probabilistic models of RNA secondary structure, analogous to profile hidden Markov models of linear sequence. The dynamic programming algo...
Sean R. Eddy
ASPLOS
2006
ACM
15 years 7 months ago
Exploiting coarse-grained task, data, and pipeline parallelism in stream programs
As multicore architectures enter the mainstream, there is a pressing demand for high-level programming models that can effectively map to them. Stream programming offers an attrac...
Michael I. Gordon, William Thies, Saman P. Amarasi...
98
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DAIS
2010
15 years 3 months ago
Distributed Object-Oriented Programming with RFID Technology
Our everyday environments will soon be pervaded with RFID tags integrated in physical objects. These RFID tags can store a digital representation of the physical object and transmi...
Andoni Lombide Carreton, Kevin Pinte, Wolfgang De ...
CAV
2009
Springer
209views Hardware» more  CAV 2009»
16 years 2 months ago
Static and Precise Detection of Concurrency Errors in Systems Code Using SMT Solvers
Context-bounded analysis is an attractive approach to verification of concurrent programs. Bounding the number of contexts executed per thread not only reduces the asymptotic compl...
Shuvendu K. Lahiri, Shaz Qadeer, Zvonimir Rakamari...
FPL
2007
Springer
176views Hardware» more  FPL 2007»
15 years 8 months ago
ReconOS: An RTOS supporting Hard- and Software Threads
Modern platform FPGAs integrate fine-grained reconfigurable logic with processor cores and allow the creation of complete configurable systems-on-chip. However, design methodol...
Enno Lübbers, Marco Platzner