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» Programs as polygraphs: computability and complexity
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TCBB
2010
104views more  TCBB 2010»
15 years 2 months ago
Fast Hinge Detection Algorithms for Flexible Protein Structures
— Analysis of conformational changes is one of the keys to the understanding of protein functions and interactions. For the analysis, we often compare two protein structures, tak...
Tetsuo Shibuya
HPCA
2011
IEEE
14 years 7 months ago
Dynamic parallelization of JavaScript applications using an ultra-lightweight speculation mechanism
As the web becomes the platform of choice for execution of more complex applications, a growing portion of computation is handed off by developers to the client side to reduce net...
Mojtaba Mehrara, Po-Chun Hsu, Mehrzad Samadi, Scot...
CCS
2005
ACM
15 years 9 months ago
A rewriting-based inference system for the NRL protocol analyzer: grammar generation
The NRL Protocol Analyzer (NPA) is a tool for the formal specification and analysis of cryptographic protocols that has been used with great effect on a number of complex real-l...
Santiago Escobar, Catherine Meadows, José M...
CLOUD
2010
ACM
15 years 9 months ago
Stateful bulk processing for incremental analytics
This work addresses the need for stateful dataflow programs that can rapidly sift through huge, evolving data sets. These data-intensive applications perform complex multi-step c...
Dionysios Logothetis, Christopher Olston, Benjamin...
GI
2009
Springer
15 years 8 months ago
Massively-Parallel Simulation of Biochemical Systems
: Understanding biological evolution prompts for a detailed understanding of the realized phenotype. Biochemical and gene regulatory dynamics are a cornerstone for the physiology o...
Jens Ackermann, Paul Baecher, Thorsten Franzel, Mi...