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» Progressive multiple sequence alignments from triplets
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IJCBDD
2008
141views more  IJCBDD 2008»
14 years 11 months ago
CLUSS2: an alignment-independent algorithm for clustering protein families with multiple biological functions
: CLUSS is an algorithm proposed for clustering both alignable and non-alignable protein sequences. However, CLUSS tends to be ineffective on protein datasets that include a large ...
Abdellali Kelil, Shengrui Wang, Ryszard Brzezinski
ICRA
2010
IEEE
135views Robotics» more  ICRA 2010»
14 years 10 months ago
Using multiple hypothesis in model-based tracking
— Classic registration methods for model-based tracking try to align the projected edges of a 3D model with the edges of the image. However, wrong matches at low level can make t...
Céline Teuliere, Éric Marchand, Laur...
BMCBI
2008
86views more  BMCBI 2008»
14 years 12 months ago
Subfamily specific conservation profiles for proteins based on n-gram patterns
Background: A new algorithm has been developed for generating conservation profiles that reflect the evolutionary history of the subfamily associated with a query sequence. It is ...
John K. Vries, Xiong Liu
NAR
2007
152views more  NAR 2007»
14 years 11 months ago
COMPASS server for remote homology inference
COMPASS is a method for homology detection and local alignment construction based on the comparison of multiple sequence alignments (MSAs). The method derives numerical profiles f...
Ruslan Sadreyev, Ming Tang, Bong-Hyun Kim, Nick V....
BMCBI
2007
117views more  BMCBI 2007»
14 years 12 months ago
Supervised multivariate analysis of sequence groups to identify specificity determining residues
Background: Proteins that evolve from a common ancestor can change functionality over time, and it is important to be able identify residues that cause this change. In this paper ...
Iain M. Wallace, Desmond G. Higgins