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» ProtTest: selection of best-fit models of protein evolution
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BIOINFORMATICS
2005
60views more  BIOINFORMATICS 2005»
15 years 16 days ago
ProtTest: selection of best-fit models of protein evolution
Federico Abascal, Rafael Zardoya, David Posada
75
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DNA
2001
Springer
125views Bioinformatics» more  DNA 2001»
15 years 5 months ago
PNA-mediated Whiplash PCR
The directed evolution of proteins, using an in vitro domainal shuffling strategy was proposed in (J. Kolkman and W. Stemmer, Nat. Biotech. 19, 423 (2001). Due to backhybridization...
John A. Rose, Russell J. Deaton, Masami Hagiya, Ak...
134
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ICCS
2009
Springer
14 years 10 months ago
A Population-Based Approach for Diversified Protein Loop Structure Sampling
Protein loop structure modeling is regarded as a mini protein folding problem with significant scientific importance. Efficiently sampling the loop conformation space is a key step...
Yaohang Li
102
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BMCBI
2008
114views more  BMCBI 2008»
15 years 23 days ago
WSPMaker: a web tool for calculating selection pressure in proteins and domains using window-sliding
Background: In the study of adaptive evolution, it is important to detect the protein coding sites where natural selection is acting. In general, the ratio of the rate of non-syno...
Yong Seok Lee, Tae-Hyung Kim, Tae-Wook Kang, Won-H...
119
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WABI
2010
Springer
167views Bioinformatics» more  WABI 2010»
14 years 11 months ago
Quantifying the Strength of Natural Selection of a Motif Sequence
Quantification of selective pressures on regulatory sequences is a central question in studying the evolution of gene regulatory networks. Previous methods focus primarily on sing...
Chen-Hsiang Yeang