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» Protein Sequence Pattern Mining with Constraints
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106
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ACMSE
2007
ACM
15 years 4 months ago
Finding association rules of cis-regulatory elements involved in alternative splicing
Alternative splicing (AS) is a major mechanism to generate protein diversity. A single gene might generate hundreds or even thousands of different proteins. Recently, powerful lar...
Jihye Kim, Sihui Zhao, Steffen Heber
118
Voted
SIGMOD
2004
ACM
162views Database» more  SIGMOD 2004»
16 years 16 days ago
Graph Indexing: A Frequent Structure-based Approach
Graph has become increasingly important in modelling complicated structures and schemaless data such as proteins, chemical compounds, and XML documents. Given a graph query, it is...
Xifeng Yan, Philip S. Yu, Jiawei Han
115
Voted
ICDM
2008
IEEE
137views Data Mining» more  ICDM 2008»
15 years 6 months ago
Stream Sequential Pattern Mining with Precise Error Bounds
Sequential pattern mining is an interesting data mining problem with many real-world applications. This problem has been studied extensively in static databases. However, in recen...
Luiz F. Mendes, Bolin Ding, Jiawei Han
TCBB
2010
98views more  TCBB 2010»
14 years 7 months ago
VARUN: Discovering Extensible Motifs under Saturation Constraints
Abstract-The discovery of motifs in biosequences is frequently torn between the rigidity of the model on the one hand and the abundance of candidates on the other. In particular, m...
Alberto Apostolico, Matteo Comin, Laxmi Parida
132
Voted
SP
2008
IEEE
159views Security Privacy» more  SP 2008»
15 years 9 days ago
Inferring neuronal network connectivity from spike data: A temporal data mining approach
Abstract. Understanding the functioning of a neural system in terms of its underlying circuitry is an important problem in neuroscience. Recent developments in electrophysiology an...
Debprakash Patnaik, P. S. Sastry, K. P. Unnikrishn...