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» Protein identification as an information retrieval problem
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URBAN
2011
185views more  URBAN 2011»
13 years 1 months ago
Supporting geographically-aware web document foraging and sensemaking
This paper reports on the development and application of strategies and tools for geographic information seeking and knowledge building that leverages unstructured text resources ...
Brian M. Tomaszewski, Justine Blanford, Kevin Ross...
BMCBI
2010
154views more  BMCBI 2010»
13 years 6 months ago
An eScience-Bayes strategy for analyzing omics data
Background: The omics fields promise to revolutionize our understanding of biology and biomedicine. However, their potential is compromised by the challenge to analyze the huge da...
Martin Eklund, Ola Spjuth, Jarl E. S. Wikberg
BMCBI
2006
151views more  BMCBI 2006»
13 years 6 months ago
Machine learning and word sense disambiguation in the biomedical domain: design and evaluation issues
Background: Word sense disambiguation (WSD) is critical in the biomedical domain for improving the precision of natural language processing (NLP), text mining, and information ret...
Hua Xu, Marianthi Markatou, Rositsa Dimova, Hongfa...
SISAP
2010
IEEE
135views Data Mining» more  SISAP 2010»
13 years 4 months ago
Improving the similarity search of tandem mass spectra using metric access methods
In biological applications, the tandem mass spectrometry is a widely used method for determining protein and peptide sequences from an ”in vitro” sample. The sequences are not...
Jiri Novák, Tomás Skopal, David Hoks...
BMCBI
2005
107views more  BMCBI 2005»
13 years 6 months ago
An edit script for taxonomic classifications
Abstract. Taxonomy provides one of the most powerful ways to navigate sequence data bases but currently, users are forced to formulate queries according to a single taxonomic class...
Roderic D. M. Page, Gabriel Valiente