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» Protein secondary structure prediction using neural networks
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BMCBI
2004
196views more  BMCBI 2004»
15 years 6 days ago
MUSCLE: a multiple sequence alignment method with reduced time and space complexity
Background: In a previous paper, we introduced MUSCLE, a new program for creating multiple alignments of protein sequences, giving a brief summary of the algorithm and showing MUS...
Robert C. Edgar
BMCBI
2005
122views more  BMCBI 2005»
15 years 7 days ago
A neural strategy for the inference of SH3 domain-peptide interaction specificity
Background: The SH3 domain family is one of the most representative and widely studied cases of so-called Peptide Recognition Modules (PRM). The polyproline II motif PxxP that gen...
Enrico Ferraro, Allegra Via, Gabriele Ausiello, Ma...
BMCBI
2010
227views more  BMCBI 2010»
15 years 14 days ago
Accurate and efficient gp120 V3 loop structure based models for the determination of HIV-1 co-receptor usage
Background: HIV-1 targets human cells expressing both the CD4 receptor, which binds the viral envelope glycoprotein gp120, as well as either the CCR5 (R5) or CXCR4 (X4) co-recepto...
Majid Masso, Iosif I. Vaisman
NIPS
1994
15 years 1 months ago
A Connectionist Technique for Accelerated Textual Input: Letting a Network Do the Typing
Each yearpeoplespendahugeamountoftimetyping. Thetextpeopletype typically contains a tremendousamount of redundancy due to predictable word usage patterns and the text's struc...
Dean Pomerleau
ICTAI
2007
IEEE
15 years 6 months ago
A Java-Based Distributed Genetic Algorithm Framework
Distributed Genetic Algorithm (DGA) is one of the most promising choices among the optimization methods. In this paper we describe DGAFrame, a flexible framework for evolutionary...
Gabi Escuela, Yudith Cardinale, Jorge Gonzá...