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» Proving Properties of Dynamic Process Networks
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BMCBI
2008
103views more  BMCBI 2008»
14 years 11 months ago
Detection of protein catalytic residues at high precision using local network properties
Background: Identifying the active site of an enzyme is a crucial step in functional studies. While protein sequences and structures can be experimentally characterized, determini...
Patrick Slama, Ioannis Filippis, Michael Lappe
CIBCB
2008
IEEE
15 years 5 months ago
Temporal and structural analysis of biological networks in combination with microarray data
— We introduce a graph-based relational learning approach using graph-rewriting rules for temporal and structural analysis of biological networks changing over time. The analysis...
Chang Hun You, Lawrence B. Holder, Diane J. Cook
PACT
2001
Springer
15 years 3 months ago
Static Analysis for Secrecy and Non-interference in Networks of Processes
We introduce the νSPI-calculus that strengthens the notion of “perfect symmetric cryptography” of the spi-calculus by taking time into account. This involves defining an oper...
Chiara Bodei, Pierpaolo Degano, Flemming Nielson, ...
IDEAL
2005
Springer
15 years 4 months ago
Neural Networks: A Replacement for Gaussian Processes?
Abstract. Gaussian processes have been favourably compared to backpropagation neural networks as a tool for regression. We show that a recurrent neural network can implement exact ...
Matthew Lilley, Marcus R. Frean
SIAMAM
2010
119views more  SIAMAM 2010»
14 years 9 months ago
The Dynamics of Weakly Reversible Population Processes near Facets
This paper concerns the dynamical behavior of weakly reversible, deterministically modeled population processes near the facets (codimension-one faces) of their invariant manifolds...
David F. Anderson, Anne Shiu