— Biomolecular simulations play a key role in the study of complex biological processes at microscopic levels in which macromolecules such as proteins are involved. The simulatio...
Yudong Sun, Steve McKeever, Kia Balali-Mood, Mark ...
As multicore systems continue to gain ground in the High Performance Computing world, linear algebra algorithms have to be reformulated or new algorithms have to be developed in or...
Alfredo Buttari, Julien Langou, Jakub Kurzak, Jack...
There is a growing need for systems that can monitor and analyze application performance data automatically in order to deliver reliable and sustained performance to applications....
Lingyun Yang, Jennifer M. Schopf, Catalin Dumitres...
The effect of the operating system on application performance is an increasingly important consideration in high performance computing. OS kernel measurement is key to understandi...
Aroon Nataraj, Allen D. Malony, Sameer Shende, Ala...
Bioinformatics algorithms such as sequence alignment methods based on profile-HMM (Hidden Markov Model) are popular but CPU-intensive. If large amounts of data are processed, a s...
Heinz Stockinger, Marco Pagni, Lorenzo Cerutti, La...