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CLADE
2008
IEEE
15 years 4 months ago
SWARM: a scientific workflow for supporting bayesian approaches to improve metabolic models
With the exponential growth of complete genome sequences, the analysis of these sequences is becoming a powerful approach to build genome-scale metabolic models. These models can ...
Xinghua Shi, Rick Stevens
SC
2009
ACM
15 years 4 months ago
Early performance evaluation of a "Nehalem" cluster using scientific and engineering applications
In this paper, we present an early performance evaluation of a 624-core cluster based on the Intel® Xeon® Processor 5560 (code named “Nehalem-EP”, and referred to as Xeon 55...
Subhash Saini, Andrey Naraikin, Rupak Biswas, Davi...
PPSC
1997
14 years 11 months ago
High-Performance Object-Oriented Scientific Programming in Fortran 90
We illustrate how Fortran 90 supports object-oriented concepts by example of plasma particle computations on the IBM SP. Our experience shows that Fortran 90 and object-oriented m...
Charles D. Norton, Viktor K. Decyk, Boleslaw K. Sz...
CCGRID
2010
IEEE
14 years 11 months ago
A High-Level Interpreted MPI Library for Parallel Computing in Volunteer Environments
Idle desktops have been successfully used to run sequential and master-slave task parallel codes on a large scale in the context of volunteer computing. However, execution of messa...
Troy P. LeBlanc, Jaspal Subhlok, Edgar Gabriel
IPPS
2009
IEEE
15 years 4 months ago
DMTCP: Transparent checkpointing for cluster computations and the desktop
DMTCP (Distributed MultiThreaded CheckPointing) is a transparent user-level checkpointing package for distributed applications. Checkpointing and restart is demonstrated for a wid...
Jason Ansel, Kapil Arya, Gene Cooperman