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87
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RECOMB
2004
Springer
16 years 23 days ago
Structured motifs search
In this paper we describe an algorithm for the localization of structured models, i.e. sequences of (simple) motifs and distance constraints. It basically combines standard patter...
Alberto Policriti, Nicola Vitacolonna, Michele Mor...
95
Voted
RECOMB
2003
Springer
16 years 23 days ago
A multi-expert system for the automatic detection of protein domains from sequence information
We describe a novel method for detecting the domain structure of a protein from sequence information alone. The method is based on analyzing multiple sequence alignments that are ...
Niranjan Nagarajan, Golan Yona
BMCBI
2005
119views more  BMCBI 2005»
15 years 10 days ago
The distance-profile representation and its application to detection of distantly related protein families
Background: Detecting homology between remotely related protein families is an important problem in computational biology since the biological properties of uncharacterized protei...
Chin-Jen Ku, Golan Yona
102
Voted
NAR
1998
94views more  NAR 1998»
15 years 3 days ago
SGD: Saccharomyces Genome Database
The Saccharomyces Genome Database (SGD) provides Internet access to the complete Saccharomyces cerevisiae genomic sequence, its genes and their products, the phenotypes of its mut...
J. Michael Cherry, Caroline Adler, Catherine A. Ba...
WABI
2009
Springer
130views Bioinformatics» more  WABI 2009»
15 years 7 months ago
Linear-Time Protein 3-D Structure Searching with Insertions and Deletions
It becomes more and more important to search for similar structures from molecular 3-D structure databases in the structural biology of the post genomic era. Two molecules are said...
Tetsuo Shibuya, Jesper Jansson, Kunihiko Sadakane