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CF
2009
ACM
13 years 10 months ago
Quantitative analysis of sequence alignment applications on multiprocessor architectures
The exponential growth of databases that contains biological information (such as protein and DNA data) demands great efforts to improve the performance of computational platforms...
Friman Sánchez, Alex Ramírez, Mateo ...
IISWC
2006
IEEE
13 years 10 months ago
Performance Analysis of Sequence Alignment Applications
— Recent advances in molecular biology have led to a continued growth in the biological information generated by the scientific community. Additionally, this area has become a m...
Friman Sánchez, Esther Salamí, Alex ...
ASAP
2000
IEEE
184views Hardware» more  ASAP 2000»
13 years 8 months ago
Tradeoff Analysis and Architecture Design of a Hybrid Hardware/Software Sorter
Sorting long sequences of keys is a problem that occurs in many different applications. For embedded systems, a uniprocessor software solution is often not applicable due to the l...
Marcus Bednara, Oliver Beyer, Jürgen Teich, R...
CISIS
2010
IEEE
13 years 11 months ago
Scalability Analysis of Progressive Alignment on a Multicore
—Sequence alignment is a fundamental instrument in Bioinformatics. In recent years, numerous proposals have been addressing the problem of accelerating this class of applications...
Sebastian Isaza, Friman Sánchez, Georgi Gay...
ISOLA
2010
Springer
13 years 2 months ago
Ten Years of Performance Evaluation for Concurrent Systems Using CADP
This article comprehensively surveys the work accomplished during the past decade on an approach to analyze concurrent systems qualitatively and quantitatively, by combining functi...
Nicolas Coste, Hubert Garavel, Holger Hermanns, Fr...