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ECCC
2007
124views more  ECCC 2007»
15 years 22 days ago
Testing Hereditary Properties of Non-Expanding Bounded-Degree Graphs
We study graph properties which are testable for bounded degree graphs in time independent of the input size. Our goal is to distinguish between graphs having a predetermined grap...
Artur Czumaj, Asaf Shapira, Christian Sohler
113
Voted
JPDC
2007
167views more  JPDC 2007»
15 years 20 days ago
On the design of high-performance algorithms for aligning multiple protein sequences on mesh-based multiprocessor architectures
In this paper, we address the problem of multiple sequence alignment (MSA) for handling very large number of proteins sequences on mesh-based multiprocessor architectures. As the ...
Diana H. P. Low, Bharadwaj Veeravalli, David A. Ba...
LOGCOM
2007
130views more  LOGCOM 2007»
15 years 20 days ago
A Logic for Concepts and Similarity
Categorisation of objects into classes is currently supported by (at least) two ‘orthogonal’ methods. In logic-based approaches, classifications are defined through ontologi...
Mikhail Sheremet, Dmitry Tishkovsky, Frank Wolter,...
BMCBI
2004
151views more  BMCBI 2004»
15 years 19 days ago
Design, implementation and evaluation of a practical pseudoknot folding algorithm based on thermodynamics
Background: The general problem of RNA secondary structure prediction under the widely used thermodynamic model is known to be NP-complete when the structures considered include a...
Jens Reeder, Robert Giegerich
107
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AML
1998
60views more  AML 1998»
15 years 15 days ago
A restricted computation model on Scott domains and its partial primitive recursive functionals
The paper builds on both a simply typed term system PRω and a computation model on Scott domains via so-called parallel typed while programs (PTWP). The former provides a notion ...
Karl-Heinz Niggl