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BMCBI
2008
138views more  BMCBI 2008»
14 years 9 months ago
Methods for simultaneously identifying coherent local clusters with smooth global patterns in gene expression profiles
Background: The hierarchical clustering tree (HCT) with a dendrogram [1] and the singular value decomposition (SVD) with a dimension-reduced representative map [2] are popular met...
Yin-Jing Tien, Yun-Shien Lee, Han-Ming Wu, Chun-Ho...
NIPS
2004
14 years 10 months ago
Assignment of Multiplicative Mixtures in Natural Images
In the analysis of natural images, Gaussian scale mixtures (GSM) have been used to account for the statistics of filter responses, and to inspire hierarchical cortical representat...
Odelia Schwartz, Terrence J. Sejnowski, Peter Daya...
BMCBI
2010
118views more  BMCBI 2010»
14 years 9 months ago
From learning taxonomies to phylogenetic learning: Integration of 16S rRNA gene data into FAME-based bacterial classification
Background: Machine learning techniques have shown to improve bacterial species classification based on fatty acid methyl ester (FAME) data. Nonetheless, FAME analysis has a limit...
Bram Slabbinck, Willem Waegeman, Peter Dawyndt, Pa...
BMCBI
2008
137views more  BMCBI 2008»
14 years 9 months ago
VennMaster: Area-proportional Euler diagrams for functional GO analysis of microarrays
Background: Microarray experiments generate vast amounts of data. The functional context of differentially expressed genes can be assessed by querying the Gene Ontology (GO) datab...
Hans A. Kestler, André Müller, Johann ...
DAGSTUHL
2001
14 years 10 months ago
An Overview of the GXL Graph Exchange Language
GXL (Graph eXchange Language) is designed to be a standard exchange format for graph-based tools. GXL is defined as an XML sublanguage, which offers support for exchanging instanc...
Andreas Winter, Bernt Kullbach, Volker Riediger