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SASP
2009
IEEE
291views Hardware» more  SASP 2009»
15 years 10 months ago
A parameterisable and scalable Smith-Waterman algorithm implementation on CUDA-compatible GPUs
—This paper describes a multi-threaded parallel design and implementation of the Smith-Waterman (SM) algorithm on compute unified device architecture (CUDA)-compatible graphic pr...
Cheng Ling, Khaled Benkrid, Tsuyoshi Hamada
WEBI
2009
Springer
15 years 10 months ago
Towards Bridging the Web and the Semantic Web
The World Wide Web (WWW) has provided us with a plethora of information. However, given its unstructured format, this information is useful mainly to humans and cannot be effectiv...
Swarnim Kulkarni, Doina Caragea
BIBE
2005
IEEE
126views Bioinformatics» more  BIBE 2005»
15 years 9 months ago
Highly Scalable and Accurate Seeds for Subsequence Alignment
We propose a method for finding seeds for the local alignment of two nucleotide sequences. Our method uses randomized algorithms to find approximate seeds. We present a dynamic ...
Abhijit Pol, Tamer Kahveci
SAC
2005
ACM
15 years 9 months ago
LighTS: a lightweight, customizable tuple space supporting context-aware applications
The tuple space model inspired by Linda has recently been rediscovered by distributed middleware. Moreover, some researchers also applied it in the challenging scenarios involving...
Gian Pietro Picco, Davide Balzarotti, Paolo Costa
WIDM
2005
ACM
15 years 9 months ago
Exploiting native XML indexing techniques for XML retrieval in relational database systems
In XML retrieval, two distinct approaches have been established and pursued without much cross-fertilization taking place so far. On the one hand, native XML databases tailored to...
Felix Weigel, Klaus U. Schulz, Holger Meuss