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SIGMOD
2004
ACM
149views Database» more  SIGMOD 2004»
15 years 9 months ago
Incremental Maintenance of XML Structural Indexes
Increasing popularity of XML in recent years has generated much interest in query processing over graph-structured data. To support efficient evaluation of path expressions, many ...
Ke Yi, Hao He, Ioana Stanoi, Jun Yang 0001
BMCBI
2008
178views more  BMCBI 2008»
14 years 9 months ago
A discriminative method for protein remote homology detection and fold recognition combining Top-n-grams and latent semantic ana
Background: Protein remote homology detection and fold recognition are central problems in bioinformatics. Currently, discriminative methods based on support vector machine (SVM) ...
Bin Liu, Xiaolong Wang, Lei Lin, Qiwen Dong, Xuan ...
BMCBI
2011
14 years 4 months ago
Detection of viral sequence fragments of HIV-1 subfamilies yet unknown
Background: Methods of determining whether or not any particular HIV-1 sequence stems - completely or in part - from some unknown HIV-1 subtype are important for the design of vac...
Thomas Unterthiner, Anne-Kathrin Schultz, Jan Bull...
VLDB
2002
ACM
184views Database» more  VLDB 2002»
15 years 9 months ago
Database indexing for large DNA and protein sequence collections
Our aim is to develop new database technologies for the approximate matching of unstructured string data using indexes. We explore the potential of the suffix tree data structure i...
Ela Hunt, Malcolm P. Atkinson, Robert W. Irving
WSDM
2010
ACM
259views Data Mining» more  WSDM 2010»
15 years 7 months ago
Revisiting Globally Sorted Indexes for Efficient Document Retrieval
There has been a large amount of research on efficient document retrieval in both IR and web search areas. One important technique to improve retrieval efficiency is early termina...
Fan Zhang, Shuming Shi, Hao Yan, Ji-Rong Wen