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BIBE
2008
IEEE
272views Bioinformatics» more  BIBE 2008»
15 years 7 months ago
Design and implementation of the Smith-Waterman algorithm on the CUDA-compatible GPU
— This paper describes a design and implementation of the Smith-Waterman algorithm accelerated on the graphics processing unit (GPU). Our method is implemented using compute uniï...
Yuma Munekawa, Fumihiko Ino, Kenichi Hagihara
BMCBI
2006
120views more  BMCBI 2006»
15 years 15 days ago
Projections for fast protein structure retrieval
Background: In recent times, there has been an exponential rise in the number of protein structures in databases e.g. PDB. So, design of fast algorithms capable of querying such d...
Sourangshu Bhattacharya, Chiranjib Bhattacharyya, ...
DAWAK
2011
Springer
14 years 8 days ago
An Envelope-Based Approach to Rotation-Invariant Boundary Image Matching
(The original conference version of this paper mischaracterizes the contributions of the current authors, relative to the contributions of Keogh et al. [11, 12]. We would like to ...
Sang-Pil Kim, Yang-Sae Moon, Sun-Kyong Hong
108
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ECCC
2008
122views more  ECCC 2008»
15 years 16 days ago
Every Minor-Closed Property of Sparse Graphs is Testable
Testing a property P of graphs in the bounded degree model is the following computational problem: given a graph G of bounded degree d we should distinguish (with probability 0.9,...
Itai Benjamini, Oded Schramm, Asaf Shapira
TCSV
2008
143views more  TCSV 2008»
15 years 11 days ago
High-Speed Action Recognition and Localization in Compressed Domain Videos
We present a compressed domain scheme that is able to recognize and localize actions in real-time1 . The recognition problem is posed as performing an action video query on a test ...
Chuohao Yeo, Parvez Ahammad, Kannan Ramchandran, S...