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BMCBI
2005
109views more  BMCBI 2005»
15 years 7 days ago
Genome comparison without alignment using shortest unique substrings
Background: Sequence comparison by alignment is a fundamental tool of molecular biology. In this paper we show how a number of sequence comparison tasks, including the detection o...
Bernhard Haubold, Nora Pierstorff, Friedrich M&oum...
BMCBI
2005
306views more  BMCBI 2005»
15 years 7 days ago
A method for aligning RNA secondary structures and its application to RNA motif detection
Background: Alignment of RNA secondary structures is important in studying functional RNA motifs. In recent years, much progress has been made in RNA motif finding and structure a...
Jianghui Liu, Jason Tsong-Li Wang, Jun Hu, Bin Tia...
108
Voted
DEBU
1999
112views more  DEBU 1999»
15 years 15 hour ago
Describing and Manipulating XML Data
This paper presents a brief overview of data management using the Extensible Markup Language (XML). It presents the basics of XML and the DTDs used to constrain XML data, and desc...
Sudarshan S. Chawathe
TCS
1998
15 years 2 hour ago
A Uniform Approach to Semi-Dynamic Problems on Digraphs
In this paper we propose a uniform approach to deal with incremental problems on digraphs and with decremental problems on dags generalizing a technique used by La Poutr´e and va...
Serafino Cicerone, Daniele Frigioni, Umberto Nanni...
99
Voted
VLDB
2002
ACM
131views Database» more  VLDB 2002»
14 years 12 months ago
ProTDB: Probabilistic Data in XML
Whereas traditional databases manage only deterministic information, many applications that use databases involve uncertain data. This paper presents a Probabilistic Tree Data Bas...
Andrew Nierman, H. V. Jagadish