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BMCBI
2008
211views more  BMCBI 2008»
14 years 12 months ago
CPSP-tools - Exact and complete algorithms for high-throughput 3D lattice protein studies
Background: The principles of protein folding and evolution pose problems of very high inherent complexity. Often these problems are tackled using simplified protein models, e.g. ...
Martin Mann, Sebastian Will, Rolf Backofen
CORR
2010
Springer
200views Education» more  CORR 2010»
14 years 12 months ago
Unified Compression-Based Acceleration of Edit-Distance Computation
The edit distance problem is a classical fundamental problem in computer science in general, and in combinatorial pattern matching in particular. The standard dynamic programming s...
Danny Hermelin, Gad M. Landau, Shir Landau, Oren W...
CORR
2010
Springer
182views Education» more  CORR 2010»
14 years 12 months ago
Fast Convergence of Natural Bargaining Dynamics in Exchange Networks
Bargaining networks model the behavior of a set of players who need to reach pairwise agreements for making profits. Nash bargaining solutions in this context correspond to soluti...
Yashodhan Kanoria, Mohsen Bayati, Christian Borgs,...
CORR
2010
Springer
86views Education» more  CORR 2010»
14 years 12 months ago
Online Scheduling on Identical Machines using SRPT
Due to its optimality on a single machine for the problem of minimizing average flow time, ShortestRemaining-Processing-Time (SRPT) appears to be the most natural algorithm to con...
Kyle Fox, Benjamin Moseley
BMCBI
2007
148views more  BMCBI 2007»
14 years 12 months ago
Computation of significance scores of unweighted Gene Set Enrichment Analyses
Background: Gene Set Enrichment Analysis (GSEA) is a computational method for the statistical evaluation of sorted lists of genes or proteins. Originally GSEA was developed for in...
Andreas Keller, Christina Backes, Hans-Peter Lenho...